BioJava-ModFinder: identification of protein modifications i…
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- DOI 10.1093/bioinformatics/btx101
- PMID https://pubmed.ncbi.nlm.nih.gov/28334105
- OpenAlex ID W2589205199
- Type Article
- Language EN
- Published 16 Feb 2017
- Volume 33 (13)
- Pages 2047–2049
- Source Bioinformatics
- Publisher Oxford University Press
- FWCI 0.80
- Countries 1
- Institutions 3
- Added 10 Oct 2025
- Updated 08 Oct 2026
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BioJava-ModFinder: identification of protein modifications in 3D structures from the Protein Data Bank
Article 2017 EN Hybrid
SUMMARY: We developed a new software tool, BioJava-ModFinder, for identifying protein modifications observed in 3D structures archived in the Protein Data Bank (PDB). Information on more than 400 types of protein modifications were collected and curated from annotations in PDB, RESID, and PSI-MOD. We divided these modifications into three categories: modified residues, attachment modifications, an…
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8 authors| # | Author | Institutions | ORCID |
|---|---|---|---|
| 1 | Jianjiong Gao | University of Missouri (US) | |
| 2 | Andreas Prlić | San Diego Supercomputer Center (US) University of California San D… (US) | |
| 3 | Chunxiao Bi | San Diego Supercomputer Center (US) University of California San D… (US) | — |
| 4 | Wolfgang F. Bluhm | San Diego Supercomputer Center (US) University of California San D… (US) | — |
| 5 | Dimitris Dimitropoulos | San Diego Supercomputer Center (US) University of California San D… (US) | — |
| 6 | Dong He Xu | University of Missouri (US) | |
| 7 | Philip E. Bourne | San Diego Supercomputer Center (US) University of California San D… (US) | |
| 8 | Peter W. Rose Corresponding | San Diego Supercomputer Center (US) University of California San D… (US) |
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