Shotgun metagenome data of a defined mock community using Ox…
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- DOI 10.1038/s41597-019-0287-z
- PMID https://pubmed.ncbi.nlm.nih.gov/31772173
- OpenAlex ID W2991113705
- Type Data-paper
- Language EN
- Published 26 Nov 2019
- Volume 6 (1)
- Pages 285
- Source Scientific Data
- Publisher Nature Portfolio
- Countries 3
- Institutions 9
- Added 10 Oct 2025
- Updated 14 Oct 2026
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
Data-paper 2019 EN Gold
Metagenomic sequence data from defined mock communities is crucial for the assessment of sequencing platform performance and downstream analyses, including assembly, binning and taxonomic assignment. We report a comparison of shotgun metagenome sequencing and assembly metrics of a defined microbial mock community using the Oxford Nanopore Technologies (ONT) MinION, PacBio and Illumina sequencing p…
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21 authors| # | Author | Institutions | ORCID |
|---|---|---|---|
| 1 | Volkan Sevi̇m | Joint Genome Institute (US) | |
| 2 | Juna Lee | Joint Genome Institute (US) | |
| 3 | Robert Egan | Joint Genome Institute (US) | — |
| 4 | Alicia Clum | Joint Genome Institute (US) | |
| 5 | Hope N. Hundley | Joint Genome Institute (US) | |
| 6 | Janey Lee | Joint Genome Institute (US) | |
| 7 | R. Craig Everroad | Ames Research Center (US) | — |
| 8 | Angela M. Detweiler | Ames Research Center (US) Bay Area Environmental Researc… (US) | |
| 9 | Brad M. Bebout | Ames Research Center (US) | |
| 10 | Jennifer Pett‐Ridge | Lawrence Livermore National La… (US) | |
| 11 | Markus Göker | Leibniz Institute DSMZ – Germa… (DE) | |
| 12 | Alison E. Murray | Desert Research Institute (US) | |
| 13 | Stephen R. Lindemann | Purdue University West Lafayet… (US) | |
| 14 | Hans‐Peter Klenk | Newcastle University (GB) | |
| 15 | Ronan C. O’Malley | Joint Genome Institute (US) | |
| 16 | Matthew Zane | Joint Genome Institute (US) | |
| 17 | Jan‐Fang Cheng | Joint Genome Institute (US) | |
| 18 | Alex Copeland | Joint Genome Institute (US) | |
| 19 | Chris G. Daum | Joint Genome Institute (US) | |
| 20 | Esther Singer Corresponding | Lawrence Berkeley National Lab… (US) Joint Genome Institute (US) | |
| 21 | Tanja Woyke Corresponding | Joint Genome Institute (US) |
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